rdacca.hp

rdacca.hp implements generalized canonical analysis and hierarchical partitioning methods in R to quantify predictor importance and partition variation in multi-response canonical and regression models, with primary application to ecological datasets.


Key Features:

  • Generalization of Canonical Analysis: Generalizes canonical analysis to accommodate any number of response variables, handling one slope per response per predictor.
  • Quantitative Framework for Predictor Importance: Introduces a quantitative framework that estimates the overall importance of single predictors within multi-response models.
  • Variation and Hierarchical Partitioning: Expands variation partitioning and hierarchical partitioning to estimate importance of individual predictors and groups of predictor variables without the previous computational constraint to four predictor matrices.
  • Integration of Commonality Analysis: Links commonality analysis with hierarchical partitioning to extend commonality-based interpretation from single-response regression to multiple-response scenarios.

Scientific Applications:

  • Ecological Modeling: Applied to ecological datasets to analyze relationships between multiple predictors and multiple response variables.
  • Predictor Importance Estimation: Facilitates more accurate estimation of predictor importance across complex multi-response datasets.
  • Model Interpretation: Enhances interpretability of models by partitioning variation among predictors and predictor groups.

Methodology:

Demonstrates mathematical linkages between commonality analysis, hierarchical partitioning, and variation partitioning; implements generalization frameworks allowing analysis of any number of responses or predictor variables/groups; implemented in R.

Topics

Details

License:
GPL-2.0
Tool Type:
library
Programming Languages:
R
Added:
11/29/2021
Last Updated:
11/29/2021

Operations

Data Inputs & Outputs

Feature selection

Publications

Lai J, Zou Y, Zhang J, Peres-Neto P. rdacca.hp: an R package for generalizing hierarchical and variation partitioning in multiple regression and canonical analysis. Unknown Journal. 2021. doi:10.1101/2021.03.09.434308.

Links