read-tv
read-tv visualizes longitudinal time-stamped tabular data and detects changepoints to support analysis of temporal patterns such as surgical workflow disruptions.
Key Features:
- Changepoint Analysis (CPA) and Filtering: Performs changepoint analysis (CPA) and applies user-specified filters to identify temporal intervals with altered event rates.
- Customizable Longitudinal Plots and Faceting: Generates customizable longitudinal plots with faceting for stratified visualization of time-series data.
- Reproducible R Code Export: Produces the R source code for each visualization to enable reproduction and verification of plots.
- Simple Data Input Requirements: Accepts tabular input with a time column containing no missing values provided as a file or an in-memory dataframe.
- Generalizability and Extensibility: Handles any tabular dataset meeting input requirements and can be extended by adding functionality in the source code.
- Detection and Characterization of Disruption Periods: Enables identification and characterization of periods with high disruption rates, including disruption types such as training and equipment issues linked to adverse surgical outcomes.
Scientific Applications:
- Surgical Workflow Disruption Analysis: Identifies and characterizes periods of high disruption rates in operating room workflows, including types like training and equipment issues, to relate these patterns to adverse surgical outcomes.
- Exploratory Longitudinal and Time-series Research: Supports visualization and pattern detection in time-series or longitudinal datasets across diverse research contexts.
Methodology:
Uses customizable longitudinal plotting, faceting, changepoint analysis (CPA), user-specified filters, and exports R source code for each visualization.
Topics
Details
- License:
- MIT
- Tool Type:
- command-line tool, web application
- Programming Languages:
- R
- Added:
- 10/4/2021
- Last Updated:
- 10/4/2021
Operations
Publications
Del Gaizo J, Catchpole KR, Alekseyenko AV. Research and Exploratory Analysis Driven—Time-data Visualization (read-tv) software. JAMIA Open. 2021;4(1). doi:10.1093/jamiaopen/ooab007. PMID:33709063. PMCID:PMC7935610.
PMID: 33709063
PMCID: PMC7935610
Funding: - South Carolina Translational Research (SCTR) institute: HS026491-01
Downloads
Links
Issue tracker
https://github.com/JDMusc/read-tv/issues