RegStatGel

RegStatGel performs differential analysis of two-dimensional gel electrophoresis (2D-GE) images to identify proteins with differential expression across experimental conditions.


Key Features:

  • Differential 2D-GE analysis: Performs comparative analysis of two-dimensional gel electrophoresis (2D-GE) images to detect proteins with altered expression.
  • Automated and interactive procedures: Provides both fully automated and interactive procedures for image analysis and spot comparison.
  • Detection of differentially expressed proteins: Facilitates identification of proteins that exhibit differential expression under varying experimental conditions.
  • Robust variability handling: Manages and interprets extensive variations observed in gel images.
  • Large dataset support: Handles large proteomic datasets typical of 2D-GE studies.
  • Matlab implementation: Implemented using Matlab 7.01 for computational processing.

Scientific Applications:

  • Differential proteomics: Identification of protein expression changes across experimental conditions in proteomic studies.
  • 2D-GE image analysis: Analysis and interpretation of two-dimensional gel electrophoresis images within proteomic research workflows.

Methodology:

Implemented in Matlab 7.01 and provides both fully automated and interactive procedures for processing and analyzing 2D-GE images.

Topics

Details

Tool Type:
desktop application
Operating Systems:
Windows
Programming Languages:
MATLAB
Added:
12/18/2017
Last Updated:
12/30/2018

Operations

Publications

Li F, Seillier-Moiseiwitsch F. RegStatGel: Proteomic software for identifying differentially expressed proteins based on 2D gel images. Bioinformation. 2011;6(10):389-390. doi:10.6026/97320630006389. PMID:21904427. PMCID:PMC3163918.

Links