riboseq-flow

riboseq-flow processes and performs quality control for ribosome profiling experiments using a Nextflow DSL2 pipeline with detailed metrics and visualizations for data quality evaluation.

Key Features:

• Parallel Sample Processing: The pipeline efficiently analyses multiple samples in parallel for large-scale studies.
• Automated Quality Metrics: The pipeline automatically generates detailed metrics and visualisations to assess data quality and utility.
• Reproducibility Standards: The pipeline upholds high standards in reproducibility, scalability, portability, version control and continuous integration.

Scientific Applications:

• Ribosome Profiling Data Analysis: The pipeline enables transcriptome-wide study of translation through processing and analysis of ribosome profiling experiment data.
• Data Quality Evaluation: The pipeline helps researchers evaluate the quality and utility of ribosome profiling data to guide experimental decisions.

Methodology:

The pipeline is built with Nextflow DSL2.