RIDAO

RIDAO (Rapid Intrinsic Disorder Analysis Online): Integrated high-throughput protein disorder prediction


RIDAO predicts intrinsically disordered proteins (IDPs) and disordered regions at per-residue resolution by integrating six established disorder prediction algorithms. It reproduces individual predictor outputs while enabling genome-scale intrinsic disorder analysis.


Key Features:

  • Multi-Predictor Integration: Combines six established intrinsic disorder predictors into a unified computational framework with high fidelity to original methods.
  • High-Throughput Performance: Generates per-residue disorder predictions two to six orders of magnitude faster than AUCpreD, IUPred3, metapredict V2, flDPnn, and SPOT-Disorder2.
  • Large-Scale Scalability: Processes datasets exceeding one million protein sequences (>420 million residues) from 100 organisms in under one hour.

Scientific Applications:

  • Genome-Scale Structural Bioinformatics: Enables comparative genomics and proteomics analyses of intrinsic disorder across diverse organisms and large proteome datasets.

Methodology:

RIDAO executes and consolidates predictions from six established intrinsic disorder algorithms within a unified pipeline, producing per-residue disorder scores suitable for large-scale structural and comparative analyses.

Topics

Details

Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Added:
1/30/2023
Last Updated:
11/24/2024

Operations

Publications

Dayhoff GW, Uversky VN. Rapid prediction and analysis of protein intrinsic disorder. Protein Science. 2022;31(12). doi:10.1002/pro.4496. PMID:36334049. PMCID:PMC9679974.

PMID: 36334049
PMCID: PMC9679974
Funding: - National Science Foundation of Sri Lanka: NSF‐1746051