RippleNet
RippleNet detects sharp wave ripples (SPW-R) in hippocampal CA1 local field potential (LFP) recordings to identify events relevant to memory consolidation and decision-making.
Key Features:
- Recurrent Neural Network Architecture: Employs a deep recurrent neural network with Long Short-Term Memory (LSTM) layers to learn temporal dependencies in sequential LFP data for SPW-R identification.
- Self-improving AI Methodology: Learns features of SPW-R events directly from labeled datasets via supervised learning.
- Input and Output Specifications: Processes the low-frequency component of extracellularly recorded electric potentials (LFP) as input and outputs a time-varying probability trace for SPW-R occurrence that can be thresholded to determine event timings.
- Implementation Framework: Implemented using TensorFlow's Keras framework.
Scientific Applications:
- Memory consolidation research: Detection of SPW-R events in CA1 LFPs to support analysis of hippocampal replay and memory consolidation mechanisms.
- Decision-making and neural dynamics: Identification of SPW-Rs to study their role in decision-making and related hippocampal activity patterns.
Methodology:
The recurrent neural network with LSTM layers is trained via supervised learning on curated labeled datasets containing SPW-R events and learns features directly from raw LFP data without manual feature extraction.
Topics
Details
- License:
- MIT
- Programming Languages:
- Python
- Added:
- 1/18/2021
- Last Updated:
- 2/6/2021
Operations
Publications
Hagen E, Chambers AR, Einevoll GT, Pettersen KH, Enger R, Stasik AJ. RippleNet: A Recurrent Neural Network for Sharp Wave Ripple (SPW-R) Detection. Unknown Journal. 2020. doi:10.1101/2020.05.11.087874.