rna-tools.online

rna-tools.online provides integrated RNA 3D structural bioinformatics operations for sequence analysis, structure manipulation, simulation, minimization, quality assessment, and structural comparison within RNA modeling workflows.


Key Features:

  • Comprehensive RNA 3D Analysis Suite: Supports over 100 operations including RNA sequence analysis, structural editing, energy minimization, simulation, model quality assessment, and structural comparison.
  • Model Evaluation and Benchmarking: Implements analyses aligned with RNA-Puzzles community standards for RNA 3D structure prediction and validation.

Scientific Applications:

  • RNA Structural Modeling: Facilitates prediction, refinement, validation, and comparative analysis of RNA 3D structures for functional and interaction studies.

Methodology:

rna-tools.online integrates established RNA 3D structural prediction, refinement, and evaluation algorithms into a unified computational framework supporting end-to-end RNA modeling workflows.

Topics

Details

License:
GPL-3.0
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Programming Languages:
Python, JavaScript
Added:
8/17/2022
Last Updated:
11/24/2024

Operations

Publications

Magnus M. rna-tools.online: a Swiss army knife for RNA 3D structure modeling workflow. Nucleic Acids Research. 2022;50(W1):W657-W662. doi:10.1093/nar/gkac372. PMID:35580057. PMCID:PMC9252763.

PMID: 35580057
PMCID: PMC9252763
Funding: - Regenerative Mechanisms for Health-ReMedy: MAB/2017/2

Links