Roci

Reconstruct ancestral gene orders of a phylogenetic tree. Given the topology of a phylogenetic tree and the gene orders of the leaf nodes, it calculates sets of gene orders for the inner nodes, represented by conserved intervals.

Topics

Collections

Details

Maturity:
Mature
Cost:
Free of charge
Tool Type:
api, web application
Operating Systems:
Linux, Windows, Mac
Programming Languages:
Java
Added:
1/22/2016
Last Updated:
12/10/2018

Operations

Publications

Bergeron A, Blanchette M, Chateau A, Chauve C. Reconstructing Ancestral Gene Orders Using Conserved Intervals. Lecture Notes in Computer Science. 2004. doi:10.1007/978-3-540-30219-3_2.

Documentation