RPOLY

Infer haplotypes from genotype data (by pseudo-Boolean optimization) using the pure parsimony criterion.

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Topics

Genetics

Details

Tool Type:: command-line tool
Operating Systems:: Linux, Windows
Added:: 12/18/2017
Last Updated:: 12/10/2018

Operations

Haplotype inference

Publications

Graça A, Marques-Silva J, Lynce I, Oliveira AL. Efficient Haplotype Inference with Combined CP and OR Techniques. Lecture Notes in Computer Science. None. doi:10.1007/978-3-540-68155-7_28.

DOI: 10.1007/978-3-540-68155-7_28

Graça A, Marques-Silva J, Lynce I, Oliveira AL. Efficient Haplotype Inference with Pseudo-boolean Optimization. Lecture Notes in Computer Science. None. doi:10.1007/978-3-540-73433-8_10.

DOI: 10.1007/978-3-540-73433-8_10

Links

Software catalogue

http://www.mybiosoftware.com/rpoly-1-2-1-inference-haplotypes-pure-parsimony.html

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