rSeq

Set of tools for RNA-Seq data analysis. It consists of programs that deal with many aspects of RNA-Seq data analysis, such as reference sequence generation, sequence mapping, gene and isoform expressions (RPKMs) computation, etc.

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Topics

RNA-Seq Mapping RNA-Seq RNA

Details

Tool Type:: command-line tool
Operating Systems:: Linux, Mac
Added:: 12/18/2017
Last Updated:: 5/13/2021

Operations

Sequence generation
Sequence mapping
RNA-Seq analysis

Data Inputs & Outputs

RNA-Seq analysis

Inputs

MRI image

Outputs

MRI image
- CSV

Other operations do not define inputs or outputs.

Documentation

General

http://www-personal.umich.edu/~jianghui/rseq/README.html

Other

http://www-personal.umich.edu/~jianghui/rseq/FAQ.html

Links

Software catalogue

http://www.mybiosoftware.com/rseq-0-0-7-rna-seq-analyzer.html

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