rsHRF (Python)

rsHRF (Python) estimates and deconvolves resting-state hemodynamic response functions (HRFs) from BOLD fMRI signals to enable analysis of HRF variability in resting-state neuroimaging.


Key Features:

  • Cross-Platform Implementation: Implemented in Matlab and Python.
  • HRF Estimation and Deconvolution: Estimates HRFs and performs deconvolution from resting-state BOLD signals and resting-state fMRI data.
  • Statistical Analysis Tools: Provides statistical analysis tools to assess variability and components of BOLD signals in resting-state studies.
  • Visualization Capabilities: Provides visualization options to display HRFs and related data.

Scientific Applications:

  • Resting-state fMRI interpretation: Improves interpretation of resting-state fMRI by providing HRF estimates for signal origin assessment.
  • Variability reduction: Reduces intra- and inter-subject variability in activation and connectivity measurements.
  • Connectivity and temporal precedence: Supports connectivity analyses by improving temporal precedence estimates in resting-state studies.

Methodology:

rsHRF employs a well-defined algorithm for HRF estimation and deconvolution tailored to resting-state protocols and has been validated using publicly available resting-state fMRI datasets.

Topics

Details

License:
MIT
Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Mac, Linux, Windows
Programming Languages:
Python
Added:
2/3/2022
Last Updated:
2/7/2022

Operations

Publications

Wu G, Colenbier N, Van Den Bossche S, Clauw K, Johri A, Tandon M, Marinazzo D. rsHRF: A toolbox for resting-state HRF estimation and deconvolution. NeuroImage. 2021;244:118591. doi:10.1016/j.neuroimage.2021.118591. PMID:34560269.

Documentation

Downloads