RuDReC

RuDReC provides a Russian-language corpus and neural models for extracting drug- and disease-related named entities and for detecting mentions of drug reactions and perceived effectiveness in user reviews.


Key Features:

  • Corpus Composition: A raw corpus of 1.4 million health-related texts from internet platforms in Russian and a labeled subset of 500 consumer reviews annotated at sentence and expression levels, including drug classes, forms, indications, and reactions.
  • NER and Sentence Classification: Baseline models for named entity recognition and multilabel sentence classification, including RuDR-BERT which achieves a macro F1 of 74.85% for NER and 68.82% for sentence classification, a 7.47% improvement over a standard Russian BERT.
  • Domain-Specific Pretrained Models: Domain-specific BERT models pretrained on the RuDReC corpus to improve processing of Russian health-related text.

Scientific Applications:

  • Information Extraction (IE): Extraction of drug- and disease-related entities and statements from user reviews to support comparison with traditional sources such as drug labels.
  • Adverse Drug Reaction Detection: Identification and monitoring of patient-reported adverse effects mentioned in consumer reviews.
  • Drug Effectiveness Analysis: Analysis of user-reported perceptions of pharmaceutical effectiveness described in reviews.

Methodology:

Training and evaluation of tailored BERT variants (including RuDR-BERT and domain-specific pretrained BERTs) on the 1.4 million-text raw corpus and the 500-review labeled subset for named entity recognition and multilabel sentence classification with reporting of macro F1 metrics.

Topics

Details

Added:
1/18/2021
Last Updated:
3/20/2021

Operations

Publications

Tutubalina E, Alimova I, Miftahutdinov Z, Sakhovskiy A, Malykh V, Nikolenko S. The Russian Drug Reaction Corpus and neural models for drug reactions and effectiveness detection in user reviews. Bioinformatics. 2020;37(2):243-249. doi:10.1093/bioinformatics/btaa675. PMID:32722774.

PMID: 32722774
Funding: - Russian Science Foundation: 18-11-00284