S2P

S2P is an open source application for fast and accurate processing of 2D-gel and MALDI-based mass spectrometry protein data.

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Topics

Protein expression

Details

License:: GPL-3.0
Maturity:: Emerging
Cost:: Free of charge
Tool Type:: desktop application
Operating Systems:: Linux, Windows, Mac
Programming Languages:: Java
Added:: 1/10/2017
Last Updated:: 6/16/2020

Operations

Data handling

Data Inputs & Outputs

Data handling

Inputs

Sequence
- SAM
- Textual format
Data index
- Textual format
- WIG
Data index
- TSV
- Textual format
DNA sequence (raw)
DNA sequence (raw)

Outputs

Sequence alignment (nucleic acid)
- FASTA

Publications

Unknown Authors. 11th International Conference on Practical Applications of Computational Biology & Bioinformatics. Advances in Intelligent Systems and Computing. 2017. doi:10.1007/978-3-319-60816-7.

DOI: 10.1007/978-3-319-60816-7

Documentation

Training material

http://sing.ei.uvigo.es/s2p/tutorial.html

Downloads

Binaries
http://sing-group.org/s2p/download.html
Source code
https://github.com/sing-group/s2p

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