samclip

Filter SAM file for soft and hard clipped alignments

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Topics

Genomics Bioinformatics Mapping

Details

Tool Type:: command-line tool
Operating Systems:: Linux, Mac
Programming Languages:: Perl
Added:: 4/21/2025
Last Updated:: 4/21/2025

Operations

Sequence trimming

Data Inputs & Outputs

Sequence trimming

Inputs

Nucleic acid sequence alignment

Outputs

Nucleic acid sequence alignment
- PDB

Documentation

General

https://github.com/tseemann/samclip

Downloads

Software package
Version: 0.4.0
https://anaconda.org/bioconda/samclip

Links

Repository

https://github.com/tseemann/samclip

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