SAMT

SAMT compiles a trait database of marine macrobenthic fauna from temperate South Australian waters to support trait-based analyses of biodiversity, functional diversity, and ecosystem functioning and is provided as an R package.


Key Features:

  • Comprehensive Trait Database: Contains 13 distinct traits across 54 modalities covering life history, morphology, physiology, and behaviour for macrobenthic fauna.
  • Extensive Taxonomic Coverage: Provides trait information for over 250 macrobenthic taxa from South Australia.
  • Fuzzy Coding Procedure: Incorporates outcomes from a fuzzy coding procedure to represent trait variability within species across modalities.
  • R Package Integration: Distributed with an R package for programmatic access and manipulation of the trait data.

Scientific Applications:

  • Functional Assessments: Enables assessment of species contributions to ecosystem functions in marine soft sediments.
  • Biodiversity Studies: Supports analyses of the relationship between biodiversity and ecosystem functioning in temperate Australian waters.
  • Functional Diversity Analysis: Facilitates evaluation of functional diversity within macrobenthic communities using multimodal trait data.
  • Ecosystem Functioning Research: Provides a trait framework for studying changes in ecosystem functioning under environmental or anthropogenic pressures.

Methodology:

Compiled from records of macrobenthic fauna from South Australia using a trait-based approach and fuzzy coding to classify species across multiple modalities.

Topics

Details

Tool Type:
command-line tool, library
Programming Languages:
R
Added:
3/19/2021
Last Updated:
4/3/2021

Operations

Publications

Lam‐Gordillo O, Baring R, Dittmann S. Establishing the South Australian Macrobenthic Traits (SAMT) database: A trait classification for functional assessments. Ecology and Evolution. 2020;10(24):14372-14387. doi:10.1002/ece3.7040. PMID:33552471. PMCID:PMC7771161.