SANCDB

SANCDB catalogs natural chemical compounds derived from South African biodiversity to support drug discovery and chemoinformatics research.


Key Features:

  • Comprehensive Repository: Contains a total of 1012 natural compounds, with 412 additional entries added since its inception.
  • Chemical file formats: Supports multiple chemical file formats for download and integration into analysis workflows.
  • Commercial analog links: Provides direct links to commercially available analogs in Mcule and MolPort to facilitate access to purchasable compounds.

Scientific Applications:

  • Drug Discovery: Serves as a resource for hit identification and exploration of natural product scaffolds in drug discovery.
  • Machine Learning Models: Functions as training data for machine learning models in chemoinformatics and predictive analyses.
  • Database Integration: Contributes content that is incorporated into larger chemical databases to expand available chemical information.

Methodology:

Continuously updates the repository with newly reported compounds and integrates links to Mcule and MolPort to provide commercially available analogs.

Topics

Details

Tool Type:
web application
Added:
11/29/2021
Last Updated:
11/29/2021

Operations

Data Inputs & Outputs

Publications

Diallo BN, Glenister M, Musyoka TM, Lobb K, Tastan Bishop Ö. SANCDB: an update on South African natural compounds and their readily available analogs. Journal of Cheminformatics. 2021;13(1). doi:10.1186/s13321-021-00514-2. PMID:33952332. PMCID:PMC8097257.

PMID: 33952332
PMCID: PMC8097257
Funding: - DELGEME - Wellcome Trust: 107740/Z/15/Z - Grand Challenges Africa programme: GCA/DD/rnd3/023 - H3ABioNet - NIH: U24HG006941