SASTBX

SASTBX analyzes small-angle X-ray and neutron scattering (SAXS/SANS) data to process raw scattering measurements, reconstruct low-resolution molecular shapes, and refine atomic models for biomolecular structural interpretation.


Key Features:

  • Data reduction: Performs background correction, intensity normalization, and other preprocessing of raw SAXS/SANS measurements.
  • Model reconstruction: Builds low-resolution molecular shapes directly from SAXS/SANS data for macromolecules and complexes.
  • Atomic model refinement: Integrates experimental scattering data with computational predictions to refine existing atomic models.
  • SAXS and SANS support: Handles both small-angle X-ray scattering and small-angle neutron scattering data for biomolecular analysis.

Scientific Applications:

  • Biomolecular structure interpretation: Interpreting SAXS/SANS data to determine overall shapes and sizes of biological macromolecules.
  • Low-resolution modeling: Generating low-resolution models of macromolecules and complexes when X-ray crystallography or cryo-EM are not feasible.
  • Atomic model validation and refinement: Refining atomic models using scattering data to improve agreement between models and experiments.
  • Study of dynamics and interactions: Investigating biomolecular dynamics and interactions through comparison of experimental scattering profiles and models.

Methodology:

Performs data reduction including background correction and intensity normalization, model reconstruction to build low-resolution molecular shapes from SAXS/SANS data, and refinement of atomic models by integrating experimental scattering data with computational predictions.

Topics

Collections

Details

Cost:
Free of charge
Tool Type:
workflow
Operating Systems:
Mac
Programming Languages:
C
Added:
2/16/2015
Last Updated:
12/10/2018

Operations

Publications

Liu H, Hexemer A, Zwart PH. The<i>Small Angle Scattering ToolBox</i>(<i>SASTBX</i>): an open-source software for biomolecular small-angle scattering. Journal of Applied Crystallography. 2012;45(3):587-593. doi:10.1107/s0021889812015786.

Documentation