SASTBX
SASTBX analyzes small-angle X-ray and neutron scattering (SAXS/SANS) data to process raw scattering measurements, reconstruct low-resolution molecular shapes, and refine atomic models for biomolecular structural interpretation.
Key Features:
- Data reduction: Performs background correction, intensity normalization, and other preprocessing of raw SAXS/SANS measurements.
- Model reconstruction: Builds low-resolution molecular shapes directly from SAXS/SANS data for macromolecules and complexes.
- Atomic model refinement: Integrates experimental scattering data with computational predictions to refine existing atomic models.
- SAXS and SANS support: Handles both small-angle X-ray scattering and small-angle neutron scattering data for biomolecular analysis.
Scientific Applications:
- Biomolecular structure interpretation: Interpreting SAXS/SANS data to determine overall shapes and sizes of biological macromolecules.
- Low-resolution modeling: Generating low-resolution models of macromolecules and complexes when X-ray crystallography or cryo-EM are not feasible.
- Atomic model validation and refinement: Refining atomic models using scattering data to improve agreement between models and experiments.
- Study of dynamics and interactions: Investigating biomolecular dynamics and interactions through comparison of experimental scattering profiles and models.
Methodology:
Performs data reduction including background correction and intensity normalization, model reconstruction to build low-resolution molecular shapes from SAXS/SANS data, and refinement of atomic models by integrating experimental scattering data with computational predictions.
Topics
Collections
Details
- Cost:
- Free of charge
- Tool Type:
- workflow
- Operating Systems:
- Mac
- Programming Languages:
- C
- Added:
- 2/16/2015
- Last Updated:
- 12/10/2018
Operations
Publications
Liu H, Hexemer A, Zwart PH. The<i>Small Angle Scattering ToolBox</i>(<i>SASTBX</i>): an open-source software for biomolecular small-angle scattering. Journal of Applied Crystallography. 2012;45(3):587-593. doi:10.1107/s0021889812015786.