SBOLCanvas

SBOLCanvas enables creation and editing of genetic constructs using the Synthetic Biology Open Language (SBOL) data and visual standards to represent and exchange synthetic biology designs.


Key Features:

  • SBOL compliance: Represents genetic constructs using the Synthetic Biology Open Language (SBOL) data and visual standards.
  • Visual and structural design: Enables construction and editing of genetic constructs both visually and in their underlying SBOL structural representation.
  • SynBioHub integration: Incorporates existing SBOL records from SynBioHub to incorporate stored genetic design data into projects.
  • Design lifecycle support: Supports progression of genetic designs from initial concept through finalized SBOL representations.
  • Accurate representation and exchange: Captures genetic construct elements in standardized SBOL format to enable precise communication of designs.

Scientific Applications:

  • Synthetic biology design: Creation and editing of genetic constructs represented in SBOL for research and engineering applications.
  • Data reuse and sharing: Retrieval and incorporation of SBOL designs from SynBioHub to enable reuse and reproducibility of genetic constructs.
  • Education and training: Use of standardized SBOL representations to teach genetic design concepts and standards.

Methodology:

Represents designs using SBOL data and visual standards and integrates with SynBioHub to retrieve and incorporate existing SBOL records.

Topics

Details

License:
Apache-2.0
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Programming Languages:
Java, Shell, Other
Added:
10/17/2021
Last Updated:
10/17/2021

Operations

Publications

Terry L, Earl J, Thayer S, Bridge S, Myers CJ. SBOLCanvas: A Visual Editor for Genetic Designs. ACS Synthetic Biology. 2021;10(7):1792-1796. doi:10.1021/acssynbio.1c00096. PMID:34152132.

PMID: 34152132
Funding: - National Science Foundation: 1939892

Documentation

Links