ScaPD
ScaPD catalogs scaffold proteins and their roles in signal transduction to support analysis of scaffold-mediated signaling networks.
Key Features:
- Content: Contains 273 scaffold proteins and annotations linking them to 1,118 associated signaling pathways.
- Data types: Integrates computationally predicted and experimentally validated scaffold–pathway associations.
- Manual curation: Entries are manually curated to ensure annotation quality.
- Biological focus: Centers exclusively on scaffold proteins and their roles in tethering signaling molecules and regulating pathway selectivity.
Scientific Applications:
- Signaling network analysis: Enables exploration of scaffold-mediated interactions within cellular signaling networks.
- Pathway regulation studies: Supports investigation of how scaffold proteins influence pathway selectivity and signaling outcomes.
- Disease and target research: Facilitates studies of disease mechanisms and identification of potential therapeutic targets involving scaffold proteins.
- Basic research: Serves as a reference for studying scaffold protein functions in cellular processes.
Methodology:
Integrates computationally predicted and experimentally validated data and applies manual curation of entries.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 7/28/2018
- Last Updated:
- 1/17/2019
Operations
Publications
Han X, Wang J, Wang J, Liu S, Hu J, Zhu H, Qian J. ScaPD: a database for human scaffold proteins. BMC Bioinformatics. 2017;18(S11). doi:10.1186/s12859-017-1806-6. PMID:28984188. PMCID:PMC5629588.