SegDGAN
SegDGAN performs automated prostate gland segmentation from magnetic resonance imaging (MRI) using generative adversarial networks (GANs) to improve delineation accuracy for diagnosis and treatment planning.
Key Features:
- Automatic Segmentation: Produces automatic prostate gland delineations from MRI to replace manual segmentation steps.
- Fully Convolutional Generator: Implements a fully convolutional generation network incorporating densely connected blocks to enhance feature learning and segmentation precision.
- Multi-Scale Critic Network: Employs a critic network configured for multi-scale feature extraction to improve adversarial supervision of segmentation outputs.
- Loss Functions: Optimizes an objective function combining mean absolute error (MAE) and Dice coefficient to align predictions with ground truth segmentation.
- Comparative Evaluation: Evaluated against U-Net, FCN, and SegAN on a 220-patient clinical dataset and the public PROMISE12 dataset using DSC, VOE, ASD, and HD metrics.
- Quantitative Performance: Reported results include DSC=91.66%, VOE=15.28%, ASD=0.51 mm, HD=11.58 mm on the clinical dataset, and DSC=86.24%, VOE=23.60%, ASD=1.02 mm, HD=7.57 mm on PROMISE12.
Scientific Applications:
- Prostate MRI segmentation for diagnosis: Provides delineations that support prostate disease detection and localization in MRI.
- Treatment planning: Supplies segmentation outputs usable for planning interventions and radiotherapy targeting.
- Monitoring and longitudinal studies: Enables consistent segmentation across datasets to support follow-up and comparative analyses.
Methodology:
Uses a classic GAN framework with a fully convolutional generator containing densely connected blocks and a critic network for multi-scale feature extraction, trained by optimizing mean absolute error and Dice coefficient.
Topics
Details
- Programming Languages:
- Python
- Added:
- 1/18/2021
- Last Updated:
- 2/16/2021
Operations
Publications
Wang W, Wang G, Wu X, Ding X, Cao X, Wang L, Zhang J, Wang P. Automatic segmentation of prostate magnetic resonance imaging using generative adversarial networks. Clinical Imaging. 2021;70:1-9. doi:10.1016/j.clinimag.2020.10.014. PMID:33120283.
PMID: 33120283
Funding: - Science and Technology Commission of Shanghai Municipal: 17411952300
- National Natural Science Foundation of China: 81901733
- Tongji Hospital of Tongji University School of Medicine: TJ1912