SeqCalc
SeqCalc performs computational sequence analysis and automated experimental calculations to manage and interpret sequence data generated by rapid genome sequencing technologies.
Key Features:
- Computational sequence analysis: Performs computational sequence analysis of biological sequence data.
- Automated experimental calculations: Executes automated experimental calculations for experimental and analytical tasks.
- Ten distinct applications: Provides a comprehensive suite of ten distinct applications covering multiple sequence-analysis tasks.
- Integrated functionality: Integrates multiple sequence-analysis functionalities into a single package.
- Rapid genome sequencing data handling: Addresses management and interpretation of large datasets produced by rapid genome sequencing technologies.
- Implementation languages: Implemented using Perl and TCL/Tk scripts.
Scientific Applications:
- Genomic studies: Analysis and interpretation of sequence data in genomic investigations.
- Sequence data analysis: Processing and interpreting sequence datasets generated by rapid genome sequencing technologies.
- Routine analyses for researchers: Supports routine computational analyses used by experimental and computational researchers.
- Automated experimental calculations: Provides calculation outputs to support experimental and analytical workflows.
Methodology:
Implemented as Perl and TCL/Tk scripts.
Topics
Details
- Tool Type:
- desktop application
- Operating Systems:
- Windows
- Added:
- 8/3/2017
- Last Updated:
- 11/25/2024
Operations
Publications
Vignesh D, Parameswar P, Jin KH, Pyo LY. SeqCalc: A portable bioinformatics software for sequence analysis. Bioinformation. 2010;5(3):85-88. doi:10.6026/97320630005085. PMID:21364786. PMCID:PMC3041003.