SeqCalc

SeqCalc performs computational sequence analysis and automated experimental calculations to manage and interpret sequence data generated by rapid genome sequencing technologies.


Key Features:

  • Computational sequence analysis: Performs computational sequence analysis of biological sequence data.
  • Automated experimental calculations: Executes automated experimental calculations for experimental and analytical tasks.
  • Ten distinct applications: Provides a comprehensive suite of ten distinct applications covering multiple sequence-analysis tasks.
  • Integrated functionality: Integrates multiple sequence-analysis functionalities into a single package.
  • Rapid genome sequencing data handling: Addresses management and interpretation of large datasets produced by rapid genome sequencing technologies.
  • Implementation languages: Implemented using Perl and TCL/Tk scripts.

Scientific Applications:

  • Genomic studies: Analysis and interpretation of sequence data in genomic investigations.
  • Sequence data analysis: Processing and interpreting sequence datasets generated by rapid genome sequencing technologies.
  • Routine analyses for researchers: Supports routine computational analyses used by experimental and computational researchers.
  • Automated experimental calculations: Provides calculation outputs to support experimental and analytical workflows.

Methodology:

Implemented as Perl and TCL/Tk scripts.

Topics

Details

Tool Type:
desktop application
Operating Systems:
Windows
Added:
8/3/2017
Last Updated:
11/25/2024

Operations

Publications

Vignesh D, Parameswar P, Jin KH, Pyo LY. SeqCalc: A portable bioinformatics software for sequence analysis. Bioinformation. 2010;5(3):85-88. doi:10.6026/97320630005085. PMID:21364786. PMCID:PMC3041003.

Documentation

Links