Sex Dimorphism
Sex Dimorphism analyzes sex- and age-related differences in immune-system epigenomic and transcriptomic profiles from peripheral blood mononuclear cells (PBMCs) using ATAC-seq, RNA-seq, and flow cytometry to define epigenomic signatures of immune aging.
Key Features:
- Comprehensive Data Integration: Integrates ATAC-seq, RNA-seq, and flow cytometry data to provide a multi-omic view of immune changes across ages and sexes.
- Epigenomic Signature Characterization: Identifies shared epigenomic markers of aging, including decline in naïve T cell functions and increases in monocyte and cytotoxic cell activities.
- Sex-Specific Insights: Highlights sex-specific differences such as a more pronounced decline in B-cell specific loci and earlier onset of age-related epigenomic changes in men compared to women.
- Age-Related Epigenomic Visualization: Visualizes the relationships between age, sex, and immune phenotypes at the epigenomic and transcriptomic level.
- Research Utility: Supports identification of molecular features relevant to lifespan and health-span differences and potential therapeutic targets related to immune aging.
Scientific Applications:
- Sexual dimorphism in immune aging: Enables investigation of molecular bases for sex-specific trajectories of immune system aging.
- Biomarker and target discovery: Facilitates identification of epigenomic and transcriptomic markers and potential therapeutic targets associated with age-related immune decline.
Methodology:
Processes data from a cohort of 172 healthy adults aged 22–93 years using ATAC-seq for chromatin accessibility, RNA-seq for transcriptomic profiling, and flow cytometry for detailed cell population analysis.
Topics
Details
- Tool Type:
- web application
- Added:
- 11/14/2019
- Last Updated:
- 11/24/2024
Operations
Data Inputs & Outputs
Base-calling
Publications
Márquez EJ, Chung C, Marches R, Rossi RJ, Nehar-Belaid D, Eroglu A, Mellert DJ, Kuchel GA, Banchereau J, Ucar D. Sexual-dimorphism in human immune system aging. Nature Communications. 2020;11(1). doi:10.1038/s41467-020-14396-9. PMID:32029736. PMCID:PMC7005316.