SIM (ExPASy)

SIM finds a user-defined number of best non-intersecting alignments between two protein sequences or within a sequence. Results can be viewed with LALNVIEW, a graphical viewer program for pairwise alignments.

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Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
12/6/2017
Last Updated:
9/4/2019

Operations

Publications

Huang X, Miller W. A time-efficient, linear-space local similarity algorithm. Advances in Applied Mathematics. 1991;12(3):337-357. doi:10.1016/0196-8858(91)90017-d.

Documentation