SimCOVID
SimCOVID simulates and analyzes the spread of COVID-19 to estimate transmission parameters and predict outbreak dynamics.
Key Features:
- Simulation Frameworks: Implements Simulink block-diagram programs and MATLAB scripts for simulation.
- Mathematical Models: Implements SIR, SEIR, and SEIRD epidemiological models represented by differential-algebraic equations.
- Model Adaptability: Allows modification and customization of model structure and parameters.
- Dynamic Tracking Methodology: Represents outbreak dynamics using a sum of sigmoid functions to capture temporal changes in infection rates.
- Parameter Estimation: Uses MATLAB parameter estimation to compute infection and recovery rate functions and applies statistical analyses including linear analysis, mean, root-mean-square, and standard deviation.
- Predictive Modeling with ANFIS: Integrates an adaptive neuro-fuzzy inference system (ANFIS) for training models and predicting outcomes.
Scientific Applications:
- Research Studies: Enables analysis of COVID-19 spread patterns, evaluation of intervention scenarios, and exploration of model and parameter configurations.
- Educational Use: Provides hands-on computational examples for teaching infectious disease modeling and parameter estimation methods.
Methodology:
Implements SIR/SEIR/SEIRD differential-algebraic equation models via Simulink and MATLAB scripts, applies a sum of sigmoid functions for dynamic tracking, performs MATLAB parameter estimation on infection and recovery rate functions with linear analysis, mean, root-mean-square and standard deviation metrics, and employs ANFIS for training and prediction.
Topics
Collections
Details
- Cost:
- Free of charge (with restrictions)
- Tool Type:
- library
- Operating Systems:
- Windows, Linux, Mac
- Programming Languages:
- MATLAB
- Added:
- 5/5/2021
- Last Updated:
- 5/7/2021
Operations
Publications
Abdulrahman I. SimCOVID: Open-Source Simulation Programs for the COVID-19 Outbreak. Unknown Journal. 2020. doi:10.1101/2020.04.13.20063354.