Spatial Omics Galaxy
A workbench for reproducible spatial omics processing in Galaxy.
Topics
Collections
Details
- Maturity:
- Emerging
- Cost:
- Free of charge
- Tool Type:
- workflow
- Added:
- 9/29/2026
- Last Updated:
- 9/29/2026
Operations
Data Inputs & Outputs
Data filtering
Links
Repository
https://workflowhub.eu/workflows/2174(SPICA workflow (spatial integration cluster analysis).
A comprehensive Galaxy workflow for the end-to-end analysis of spatial transcriptomics data, featuring automated QC, clustering, spatial statistics, cell type annotation, and cell-cell communication.)
Other
https://elixir-europe.org/how-we-work/scientific-programme/science/cmr/spatial2(Spatial2Galaxy ELIXIR CMR project)