SpectraST
SpectraST performs spectral library searching of peptide MS/MS data to match experimental spectra to reference spectra for peptide and protein identification in proteomics.
Key Features:
- Library Searching: Compares experimental peptide MS/MS spectra against a curated spectral library to identify peptides and infer proteins.
Scientific Applications:
- Proteomics Research: Facilitates identification of proteins in complex biological samples using peptide MS/MS spectral matches.
- Disease Biomarker Discovery: Assists in detecting potential biomarkers for diseases such as COPD and neuropsychiatric disorders via spectral identification of peptides and proteins.
- Nutritional Studies: Analyzes protein content in dietary studies, including prenatal nutrition, through spectral matching of peptides.
Methodology:
Matches experimental peptide MS/MS spectra against entries in a curated spectral library for peptide identification.
Topics
Collections
Details
- Tool Type:
- desktop application, web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 1/17/2017
- Last Updated:
- 3/26/2019
Operations
Publications
Unknown Authors. Currents: Using proteomics and cell biology to blaze a trail through blood vessels | Proteomics of HDL | Prenatal vitamin D deficiency and neuropsychiatric disorders | Who will get COPD? | Detection of the xenometabolome | Ham with a pinch of peptides | TOOLbox: SpectraST for spectral library searching | Standard format for iTRAQ | TOPP | Peak screening. Journal of Proteome Research. 2007;6(5):1635-1637. doi:10.1021/pr0707408.
Documentation
Downloads
- Source codehttp://www.peptideatlas.org/speclib/