SpectraST

SpectraST performs spectral library searching of peptide MS/MS data to match experimental spectra to reference spectra for peptide and protein identification in proteomics.


Key Features:

  • Library Searching: Compares experimental peptide MS/MS spectra against a curated spectral library to identify peptides and infer proteins.

Scientific Applications:

  • Proteomics Research: Facilitates identification of proteins in complex biological samples using peptide MS/MS spectral matches.
  • Disease Biomarker Discovery: Assists in detecting potential biomarkers for diseases such as COPD and neuropsychiatric disorders via spectral identification of peptides and proteins.
  • Nutritional Studies: Analyzes protein content in dietary studies, including prenatal nutrition, through spectral matching of peptides.

Methodology:

Matches experimental peptide MS/MS spectra against entries in a curated spectral library for peptide identification.

Topics

Collections

Details

Tool Type:
desktop application, web application
Operating Systems:
Linux, Windows, Mac
Added:
1/17/2017
Last Updated:
3/26/2019

Operations

Publications

Unknown Authors. Currents: Using proteomics and cell biology to blaze a trail through blood vessels | Proteomics of HDL | Prenatal vitamin D deficiency and neuropsychiatric disorders | Who will get COPD? | Detection of the xenometabolome | Ham with a pinch of peptides | TOOLbox: SpectraST for spectral library searching | Standard format for iTRAQ | TOPP | Peak screening. Journal of Proteome Research. 2007;6(5):1635-1637. doi:10.1021/pr0707408.

Documentation

Downloads

Links

Software catalogue
http://ms-utils.org