SpeedyGenesXL
SpeedyGenesXL generates ultralarge bespoke variant gene libraries to enable systematic exploration of protein sequence space for directed evolution and protein engineering.
Key Features:
- Automation and high-throughput capability: Automates production of diverse gene libraries to increase throughput in library preparation.
- Supported library types: Generates wild-type genes, Boolean OR, combinatorial, and combinatorial-OR-type libraries.
- Bespoke ultralarge variant synthesis: Enables creation of application-specific ultralarge variant gene libraries.
- Cost reduction in library sourcing: Reduces reliance on commercial libraries for large-scale directed evolution experiments.
Scientific Applications:
- Protein engineering: Facilitates directed evolution to improve catalytic efficiency (k_cat), thermostability, and organic solvent tolerance.
- Variant discovery and screening: Enables systematic exploration of protein sequence space using ultralarge libraries for identification of desirable variants.
Methodology:
Builds upon the SpeedyGenes methodology for generating diverse genetic libraries and automates simultaneous production of multiple bespoke libraries.
Topics
Details
- License:
- Not licensed
- Cost:
- Free of charge
- Tool Type:
- command-line tool
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- Python
- Added:
- 9/1/2022
- Last Updated:
- 11/24/2024
Operations
Publications
Sadler JC, Swainston N, Dunstan MS, Currin A, Kell DB. SpeedyGenesXL: an Automated, High-Throughput Platform for the Preparation of Bespoke Ultralarge Variant Libraries for Directed Evolution. Methods in Molecular Biology. 2022. doi:10.1007/978-1-0716-2152-3_5. PMID:35727444.
PMID: 35727444