SPLIT-PIN
SPLIT-PIN enhances optical sectioning in point-scanning microscopy by applying the SPLIT (separation of photons by lifetime tuning) algorithm to image series acquired with tunable pinhole sizes to optimize axial resolution while preserving signal-to-noise ratio.
Key Features:
- Optical Sectioning Enhancement: Applies the SPLIT (separation of photons by lifetime tuning) algorithm to image series acquired with tunable pinhole sizes to improve optical sectioning without closing the pinhole, preserving signal-to-noise ratio.
- Compatibility with Commercial Microscopes: Operates on data from microscopes equipped with tunable pinholes, including confocal and stimulated emission depletion (STED) systems.
- Image Processing Capabilities: Processes series of images acquired at different pinhole sizes to generate outputs with reduced out-of-focus background and enhanced image clarity.
Scientific Applications:
- Confocal Imaging: Improves confocal imaging and the visualization of DNA in non-adherent cell lines by reducing out-of-focus light.
- Super-Resolution STED Microscopy: Removes out-of-focus background in STED microscopy to improve image quality for sub-diffraction-limit structural analysis.
- Live Cell Imaging: Applies to live-cell imaging scenarios such as intestinal organoids stained with membrane dyes to maintain signal integrity during dynamic imaging.
Methodology:
Analyzes image series captured at various pinhole sizes and applies the SPLIT algorithm to separate photons based on their lifetimes, enabling enhanced optical sectioning and out-of-focus background reduction.
Topics
Details
- License:
- Not licensed
- Cost:
- Free of charge
- Tool Type:
- command-line tool
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- MATLAB
- Added:
- 3/17/2023
- Last Updated:
- 11/24/2024
Operations
Publications
Di Franco E, Costantino A, Cerutti E, D’Amico M, Privitera AP, Bianchini P, Vicidomini G, Gulisano M, Diaspro A, Lanzanò L. SPLIT-PIN software enabling confocal and super-resolution imaging with a virtually closed pinhole. Scientific Reports. 2023;13(1). doi:10.1038/s41598-023-29951-9. PMID:36792719. PMCID:PMC9931717.