SuperNatural 3.0

SuperNatural 3.0 provides a curated database of 449,058 natural products (NPs) and derivatives with structural, physicochemical, biosynthetic pathway, toxicity, vendor, and predictive annotations to support drug discovery, toxicology, and food science research.


Key Features:

  • Extensive Compound Repository: Contains 449,058 natural products and derivatives with structural and physicochemical annotations.
  • Pathway and Mechanism Insights: Provides biosynthetic pathway information and mechanisms of action associated with listed compounds.
  • Toxicity and Vendor Information: Includes available toxicity profiles and vendor information for certain compounds.
  • Drug-Like Chemical Space Prediction: Offers predictions of drug-like chemical space and potential therapeutic activities targeting antiviral, antibacterial, antimalarial, anticancer, and central nervous system (CNS) indications.
  • Sweet Compound Identification: Curates compounds with predicted high sweetness and taste profiles based on VirtualTaste models.
  • Integrated Data Annotations: Integrates structural, physicochemical, and biological data for compound annotation.

Scientific Applications:

  • Drug Discovery: Supports identification and prioritization of natural compounds for antiviral, antibacterial, antimalarial, anticancer, and CNS targets.
  • Food Science: Enables identification of potential natural low-calorie sweeteners using VirtualTaste-based taste predictions.
  • Toxicology Studies: Facilitates assessment of compound safety profiles using available toxicity data.
  • Biosynthesis and Mechanistic Research: Provides biosynthetic pathway and mechanism of action data to support studies of natural product biosynthesis and molecular interactions.

Methodology:

The database integrates structural, physicochemical, and biological data and employs VirtualTaste models for taste profile predictions.

Topics

Details

Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Added:
1/25/2023
Last Updated:
11/24/2024

Operations

Publications

Gallo K, Kemmler E, Goede A, Becker F, Dunkel M, Preissner R, Banerjee P. SuperNatural 3.0—a database of natural products and natural product-based derivatives. Nucleic Acids Research. 2022;51(D1):D654-D659. doi:10.1093/nar/gkac1008. PMID:36399452. PMCID:PMC9825600.

PMID: 36399452
PMCID: PMC9825600
Funding: - Deutsche Forschungsgemeinschaft: CRU339 - Food allergy and tolerance: 428445448, 428447634 - Deutsche Forschungsgemeinschaft/International: DFG TRR295 - SimLeap: 13GW0226