SuperNatural 3.0
SuperNatural 3.0 provides a curated database of 449,058 natural products (NPs) and derivatives with structural, physicochemical, biosynthetic pathway, toxicity, vendor, and predictive annotations to support drug discovery, toxicology, and food science research.
Key Features:
- Extensive Compound Repository: Contains 449,058 natural products and derivatives with structural and physicochemical annotations.
- Pathway and Mechanism Insights: Provides biosynthetic pathway information and mechanisms of action associated with listed compounds.
- Toxicity and Vendor Information: Includes available toxicity profiles and vendor information for certain compounds.
- Drug-Like Chemical Space Prediction: Offers predictions of drug-like chemical space and potential therapeutic activities targeting antiviral, antibacterial, antimalarial, anticancer, and central nervous system (CNS) indications.
- Sweet Compound Identification: Curates compounds with predicted high sweetness and taste profiles based on VirtualTaste models.
- Integrated Data Annotations: Integrates structural, physicochemical, and biological data for compound annotation.
Scientific Applications:
- Drug Discovery: Supports identification and prioritization of natural compounds for antiviral, antibacterial, antimalarial, anticancer, and CNS targets.
- Food Science: Enables identification of potential natural low-calorie sweeteners using VirtualTaste-based taste predictions.
- Toxicology Studies: Facilitates assessment of compound safety profiles using available toxicity data.
- Biosynthesis and Mechanistic Research: Provides biosynthetic pathway and mechanism of action data to support studies of natural product biosynthesis and molecular interactions.
Methodology:
The database integrates structural, physicochemical, and biological data and employs VirtualTaste models for taste profile predictions.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 1/25/2023
- Last Updated:
- 11/24/2024
Operations
Publications
Gallo K, Kemmler E, Goede A, Becker F, Dunkel M, Preissner R, Banerjee P. SuperNatural 3.0—a database of natural products and natural product-based derivatives. Nucleic Acids Research. 2022;51(D1):D654-D659. doi:10.1093/nar/gkac1008. PMID:36399452. PMCID:PMC9825600.
DOI: 10.1093/nar/gkac1008
PMID: 36399452
PMCID: PMC9825600
Funding: - Deutsche Forschungsgemeinschaft: CRU339
- Food allergy and tolerance: 428445448, 428447634
- Deutsche Forschungsgemeinschaft/International: DFG TRR295
- SimLeap: 13GW0226