SurfStamp
SurfStamp generates textures that encode residue-specific information directly onto protein surface models to enhance visualization and interpretation of 3D structures.
Key Features:
- Texture Generation: Creates textures for protein surfaces that embed residue-specific data directly onto 3D models.
- Intuitive Visualization: Overlays residue information onto the 3D object itself to indicate which residues contribute to specific surface regions.
- Integration with PyMOL: Provides a plugin for PyMOL (Schrodinger) to incorporate texture-rendered surfaces into PyMOL analyses.
Scientific Applications:
- Structural biology: Supports examination of surface residues implicated in protein function and stability.
- Bioinformatics research: Supplies residue-level surface visualizations for analyses that require mapping sequence or annotation onto structures.
- Drug design: Assists analysis of protein-ligand interfaces by visually highlighting residue contributions on binding surfaces.
Methodology:
Draws residue information directly onto protein 3D models as textures, bypassing conventional labeling functions.
Topics
Details
- License:
- Apache-2.0
- Added:
- 1/18/2021
- Last Updated:
- 2/24/2021
Operations
Publications
Oda T. SurfStamp: 3D Printer Compatible Molecular Surface Representation. Unknown Journal. 2020. doi:10.1101/2020.10.29.360701.