SurvMicro
SurvMicro analyzes prognostic microRNA (miRNA) signatures in cancer by integrating publicly available high-throughput miRNA profiles and applying multivariate survival analysis across multiple cohorts.
Key Features:
- Multivariate Survival Analysis: Implements multivariate survival analysis techniques to assess associations between miRNA signatures and clinical outcomes.
- Extensive Cohort Database: Includes data from over 40 cohorts spanning multiple tissues to enable cross-cohort evaluation.
- Public High‑throughput miRNA Integration: Integrates publicly available high-throughput miRNA profiles as input for signature assessment.
- Cross‑cohort Validation: Supports validation and refinement of miRNA signatures across independent cohorts.
- Demonstrated Cancer Contexts: Applied in analyses involving liver and lung cancer datasets.
Scientific Applications:
- Biomarker Discovery: Identification of miRNA-based biomarkers predictive of cancer clinical outcomes.
- Preclinical Evaluation: Preliminary assessment of prognostic miRNA signatures prior to clinical validation.
- Signature Refinement: Cross-cohort validation and refinement of candidate prognostic miRNA signatures.
Methodology:
Integration of public miRNA profiles combined with multivariate survival analysis techniques to evaluate and validate miRNA signatures across independent cohorts.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 8/3/2017
- Last Updated:
- 11/25/2024
Operations
Publications
Aguirre-Gamboa R, Trevino V. SurvMicro: assessment of miRNA-based prognostic signatures for cancer clinical outcomes by multivariate survival analysis. Bioinformatics. 2014;30(11):1630-1632. doi:10.1093/bioinformatics/btu087. PMID:24519378.
PMID: 24519378