SVAD

SVAD aggregates and annotates genetic variants associated with non-ischemic sudden cardiac death (SCD) to support interpretation of variants implicated in inherited cardiac diseases (ICDs).


Key Features:

  • Scope: Aggregates data on genetic variants linked to various types of inherited cardiac diseases (ICDs) known to cause non-ischemic sudden cardiac death (SCD).
  • Curation: Variant entries were manually curated from the scientific literature.
  • Content size: Contains 2,292 entries covering 1,239 distinct variants.
  • Pathogenicity annotation: Approximately one-third of variants are classified as pathogenic or likely-pathogenic according to American College of Medical Genetics and Genomics (ACMG) guidelines.
  • Data integration: Integrates information about variant effects on inherited cardiac diseases to facilitate variant interpretation.

Scientific Applications:

  • Variant interpretation: Supports interpretation of genetic variants associated with SCD and related inherited cardiac diseases.
  • Clinical genetics: Informs clinical decision-making and risk prediction for inherited cardiac diseases through curated variant annotations.
  • Research on SCD genetics: Consolidates literature-derived variant evidence to support research into the genetic underpinnings of sudden cardiac death.

Methodology:

Manual curation of scientific literature to extract and annotate variant information; variants were classified using American College of Medical Genetics and Genomics (ACMG) guidelines.

Topics

Details

Added:
1/18/2021
Last Updated:
2/24/2021

Operations

Publications

Huang W, Huang H, Chen P, Wang W, Ko T, Shrestha S, Yang C, Tai C, Chiew M, Chou Y, Hu Y, Huang H. SVAD: A genetic database curates non-ischemic sudden cardiac death-associated variants. PLOS ONE. 2020;15(8):e0237731. doi:10.1371/journal.pone.0237731. PMID:32813752. PMCID:PMC7437891.