SYNBIP
SYNBIP provides a curated database of synthetic binding proteins (SBPs) with detailed annotations of scaffolds, biophysical properties, binding targets, and sequences to support research in protein engineering, diagnostics, and therapeutic development.
Key Features:
- Comprehensive Descriptions: A catalog of thousands of SBPs with scaffold information, biophysical properties, and functional annotations.
- Binding Targets and Applications: Curated mappings that illustrate SBP binding targets and their associated research, diagnostic, or therapeutic applications.
- Sequence-Based Similarity Search: Sequence-similarity search functionality across SBP sequences and their binding targets.
Scientific Applications:
- In‑silico studies: Enables artificial intelligence and computational modeling approaches for SBP discovery and design.
- Experimental protein engineering: Facilitates selection and design of SBP scaffolds and variants for laboratory engineering efforts.
- Diagnostics and therapeutics development: Supports identification and development of SBPs for diagnostic assays and therapeutic candidates.
Methodology:
Integrates curated SBP annotations, binding-target illustrations, and sequence-based similarity search capabilities.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 3/13/2022
- Last Updated:
- 3/13/2022
Operations
Data Inputs & Outputs
Publications
Wang X, Li F, Qiu W, Xu B, Li Y, Lian X, Yu H, Zhang Z, Wang J, Li Z, Xue W, Zhu F. SYNBIP: synthetic binding proteins for research, diagnosis and therapy. Nucleic Acids Research. 2021;50(D1):D560-D570. doi:10.1093/nar/gkab926. PMID:34664670. PMCID:PMC8728148.
DOI: 10.1093/NAR/GKAB926
PMID: 34664670
PMCID: PMC8728148
Funding: - Entrepreneurship and Innovation Support Plan for Chinese Overseas Students of Chongqing: cx2020127
- Natural Science Foundation of Zhejiang Province: LR21H300001
- National Natural Science Foundation of China: 81872798, U1909208
- Fundamental Research Fund for the Central Universities: 2018QNA7023, 2019CDYGYB005
- Key R&D Program of Zhejiang Province: 2020C03010