SYNBIP

SYNBIP provides a curated database of synthetic binding proteins (SBPs) with detailed annotations of scaffolds, biophysical properties, binding targets, and sequences to support research in protein engineering, diagnostics, and therapeutic development.


Key Features:

  • Comprehensive Descriptions: A catalog of thousands of SBPs with scaffold information, biophysical properties, and functional annotations.
  • Binding Targets and Applications: Curated mappings that illustrate SBP binding targets and their associated research, diagnostic, or therapeutic applications.
  • Sequence-Based Similarity Search: Sequence-similarity search functionality across SBP sequences and their binding targets.

Scientific Applications:

  • In‑silico studies: Enables artificial intelligence and computational modeling approaches for SBP discovery and design.
  • Experimental protein engineering: Facilitates selection and design of SBP scaffolds and variants for laboratory engineering efforts.
  • Diagnostics and therapeutics development: Supports identification and development of SBPs for diagnostic assays and therapeutic candidates.

Methodology:

Integrates curated SBP annotations, binding-target illustrations, and sequence-based similarity search capabilities.

Topics

Details

Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Added:
3/13/2022
Last Updated:
3/13/2022

Operations

Publications

Wang X, Li F, Qiu W, Xu B, Li Y, Lian X, Yu H, Zhang Z, Wang J, Li Z, Xue W, Zhu F. SYNBIP: synthetic binding proteins for research, diagnosis and therapy. Nucleic Acids Research. 2021;50(D1):D560-D570. doi:10.1093/nar/gkab926. PMID:34664670. PMCID:PMC8728148.

PMID: 34664670
PMCID: PMC8728148
Funding: - Entrepreneurship and Innovation Support Plan for Chinese Overseas Students of Chongqing: cx2020127 - Natural Science Foundation of Zhejiang Province: LR21H300001 - National Natural Science Foundation of China: 81872798, U1909208 - Fundamental Research Fund for the Central Universities: 2018QNA7023, 2019CDYGYB005 - Key R&D Program of Zhejiang Province: 2020C03010