synergy

synergy computes drug combination synergy and antagonism as a Python library implementing multiple established synergy models to quantify interactions among pharmacological agents.


Key Features:

  • Implementation of synergy models: Implements a broad array of popular synergy models to provide multiple frameworks for quantifying drug–drug interactions.
  • Statistical tools: Provides evaluation of confidence intervals and power analyses to assess the reliability and significance of synergy measurements.
  • Standardized analysis and visualization: Offers standardized methodologies for analyzing and visualizing synergistic and antagonistic interactions across drug combinations.

Scientific Applications:

  • Pharmacological research: Supports quantification of combination effects to identify interactions among pharmacological agents.
  • Identification of synergistic combinations: Enables detection of combinations that produce effects greater than single-agent treatments via multiple synergy models.
  • Experimental design and hypothesis generation: Uses visualization and statistical evaluation to inform hypothesis generation and experimental planning.

Methodology:

Integrates a broad spectrum of computational synergy models and statistical techniques, including confidence interval evaluation and power analysis, to analyze drug combination data.

Topics

Details

License:
GPL-3.0
Programming Languages:
Python
Added:
1/18/2021
Last Updated:
2/25/2021

Operations

Publications

Wooten DJ, Albert R. synergy: a Python library for calculating, analyzing and visualizing drug combination synergy. Bioinformatics. 2020;37(10):1473-1474. doi:10.1093/bioinformatics/btaa826. PMID:32960970.

PMID: 32960970
Funding: - National Science Foundation: IIS-1814405, MCB-1715826

Links