T-ARDIS

T-ARDIS links protein targets to adverse drug reactions by integrating drug-protein interaction and drug-ADR databases to identify statistically significant target–ADR associations for drug safety assessment.


Key Features:

  • Integration of Databases: Combines data from drug-protein interaction databases and drug-ADR databases to identify associations between proteins and adverse drug reactions using drugs as connecting entities.
  • Comprehensive Data Repository: Contains information on over 3,000 adverse reactions, 248 protein targets, and more than 17,000 pairwise interactions.
  • Detailed Descriptions: Records include Uniprot ID, gene name, adverse effect, and drug name for each protein–drug–ADR entry.
  • Flexible Search Capabilities: Entries can be retrieved by target Uniprot ID, gene name, adverse effect, or drug name.
  • Statistical Association Analysis: Applies statistical analysis to detect significant associations between proteins and ADRs across integrated data sources.

Scientific Applications:

  • Target safety prioritization: Enables early identification of protein targets associated with ADRs to inform pharmacology and toxicology assessments.
  • ADR prediction for drug development: Predicts undesirable responses associated with protein modulation to support safer drug design.
  • Computational research and data mining: Provides a curated dataset of protein–drug–ADR associations for bioinformatics analyses.

Methodology:

Statistical analysis of integrated drug-protein interaction and drug-ADR data to identify significant associations between proteins and adverse drug reactions.

Topics

Details

License:
Apache-2.0
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Programming Languages:
Shell, Python
Added:
3/13/2022
Last Updated:
3/13/2022

Operations

Data Inputs & Outputs

Data retrieval

Inputs

Outputs

Publications

Galletti C, Bota PM, Oliva B, Fernandez-Fuentes N. Mining drug–target and drug–adverse drug reaction databases to identify target–adverse drug reaction relationships. Database. 2021;2021. doi:10.1093/database/baab068. PMID:34679164. PMCID:PMC8533369.

PMID: 34679164
PMCID: PMC8533369
Funding: - MINECO: RYC2015-17519 and BIO2017-85329-R

Links