Tailor

Tailor performs model-based clustering of high-parameter flow cytometry data using a phenotype-aware binning scheme and multivariate Gaussian mixture modeling to identify and annotate cellular populations for comparative immunophenotyping and longitudinal studies.


Key Features:

  • Phenotype-aware binning scheme: Implements an initial coarse, phenotype-sensitive binning step to manage complexity in datasets containing tens of millions of flow cytometry events.
  • Multivariate Gaussian mixture modeling: Refines the coarse model with multivariate Gaussian mixture models optimized to handle heavy-tailed distributions and inter-sample variability.
  • Robustness and benchmarking: Demonstrates resilience to moderate departures from Gaussian assumptions and sample variation as assessed by simulation studies and real-world datasets.
  • Automated non-overlapping annotations: Produces automatic, non-overlapping cluster annotations intended to be interpretable for downstream analysis.

Scientific Applications:

  • Comparative immunophenotyping: Enables consistent identification and comparison of cellular populations across different samples or experimental conditions.
  • Longitudinal studies: Supports tracking of cellular population changes over time by being robust to inter-sample variation.
  • High-dimensional data analysis: Facilitates clustering and interpretation of complex, high-parameter flow cytometry datasets to investigate cellular heterogeneity and function.

Methodology:

Integrates a phenotype-aware binning scheme to create an initial coarse model that is refined by multivariate Gaussian mixture modeling, explicitly accounting for heavy-tailed distributions in flow cytometry data.

Topics

Details

Tool Type:
command-line tool, library
Programming Languages:
R
Added:
3/19/2021
Last Updated:
4/11/2021

Operations

Publications

Ionita M, Schretzenmair R, Jones D, Moore J, Wang L, Rogers W. Tailor: Targeting heavy tails in flow cytometry data with fast, interpretable mixture modeling. Cytometry Part A. 2021;99(2):133-144. doi:10.1002/cyto.a.24307. PMID:33476090.

PMID: 33476090
Funding: - National Institute on Aging: U24‐AG041689, U54‐AG052427