TAPAS
TAPAS implements algorithms to infer patient-specific disease processes from neuroimaging, electrophysiological, and behavioral data to support Translational Neuromodeling (TN) and Computational Psychiatry (CP).
Key Features:
- Computational assays: Development of computational assays that infer patient-specific disease processes and enable mechanistically guided differential diagnosis, prediction of clinical trajectories, and estimation of treatment responses.
- Multimodal data support: Integration and analysis of neuroimaging, electrophysiological, and behavioral data for unified mechanistic modeling.
- Pipeline components: Provision of tailored experimental designs, optimization strategies prior to data acquisition, quality control during data collection, artifact correction, statistical inference, and clinical application post-acquisition.
- Clinical application support: Generation of objective analytical outputs aimed at supporting mechanistic interpretation and clinical decision-making in psychiatric, neurological, and psychosomatic contexts.
Scientific Applications:
- Mechanistic investigation of psychiatric disorders: Modeling neural and cognitive mechanisms underlying psychiatric and related disorders using computational assays applied to multimodal data.
- Individualized prognosis and treatment prediction: Prediction of individual patient clinical trajectories and treatment responses from model-derived parameters.
- Translation to clinical practice: Integration of computational model outputs into clinical workflows to improve diagnostic accuracy and therapeutic efficacy.
Methodology:
Designing experiments and optimizing measurement strategies before acquisition; quality control during data collection; artifact correction and statistical inference post-acquisition; and translation of model outputs into clinically relevant insights.
Topics
Details
- License:
- GPL-3.0
- Tool Type:
- library, workflow
- Programming Languages:
- MATLAB
- Added:
- 12/13/2021
- Last Updated:
- 11/24/2024
Operations
Publications
Frässle S, Aponte EA, Bollmann S, Brodersen KH, Do CT, Harrison OK, Harrison SJ, Heinzle J, Iglesias S, Kasper L, Lomakina EI, Mathys C, Müller-Schrader M, Pereira I, Petzschner FH, Raman S, Schöbi D, Toussaint B, Weber LA, Yao Y, Stephan KE. TAPAS: An Open-Source Software Package for Translational Neuromodeling and Computational Psychiatry. Frontiers in Psychiatry. 2021;12. doi:10.3389/fpsyt.2021.680811. PMID:34149484. PMCID:PMC8206497.