TasselNetV2plus

TasselNetV2plus performs high-throughput plant counting from high-resolution RGB imagery to support agricultural phenotyping and yield-related analyses.


Key Features:

  • Object counting paradigm: Directly regresses plant counts from imagery rather than relying on bounding-box object detection.
  • Efficiency and speed: Implements minor modifications to TasselNetV2 to achieve approximately an order-of-magnitude speedup, reaching ~30 frames per second on 1980 × 1080 images.
  • Accuracy retention: Maintains the same level of counting accuracy as the original TasselNetV2 despite reduced computational demand.
  • Crop validation: Validated on wheat ears counting, maize tassels counting, and sorghum heads counting.
  • Comparison to object detectors: Addresses computational challenges of conventional object detectors such as Faster R-CNN when applied to high-resolution images.

Scientific Applications:

  • Plant phenotyping workflows: Provides accurate count data for stages including seed breeding, germination, cultivation, fertilization, and pollination.
  • Yield estimation and harvesting: Supplies high-resolution count estimates useful for yield estimation and harvest planning.
  • UAV and high-throughput platforms: Suited for integration with unmanned aerial vehicle (UAV) imagery and other high-throughput phenotyping platforms.

Methodology:

Profiled computational bottlenecks in the original TasselNetV2 and implemented minor, strategic modifications while retaining the direct count-regression object counting paradigm.

Topics

Details

License:
GPL-3.0
Programming Languages:
Python, Shell
Added:
1/18/2021
Last Updated:
2/26/2021

Operations

Publications

Lu H, Cao Z. TasselNetV2+: A Fast Implementation for High-Throughput Plant Counting From High-Resolution RGB Imagery. Frontiers in Plant Science. 2020;11. doi:10.3389/fpls.2020.541960. PMID:33365037. PMCID:PMC7750361.