TemplateFlow
TemplateFlow provides a centralized, versioned archive of human and nonhuman neuroimaging templates and atlases to standardize reference anatomies and support reproducible neuroimaging analyses.
Key Features:
- Centralized Repository: A centralized archive of human and nonhuman imaging templates and atlases.
- Programmatic Access: A client for programmatic retrieval and integration of template and atlas resources.
- Extensibility and Contribution: A transparent pathway for researchers to contribute and vet new templates and atlases.
- Software Engineering Best Practices: Implementation of unambiguous resource identification, data management, versioning, synchronization, programmatic extensibility, and continuous integration.
- FAIR Principles Compliance: Adoption of findable, accessible, interoperable, and reusable standards for distributing templates and atlases.
Scientific Applications:
- Multiverse template analyses: Enables testing whether neuroimaging results generalize across standard references, templates, atlases, and spatial scales.
- Cross-species reference standardization: Supports analyses using both human and nonhuman templates and atlases to facilitate comparative neuroimaging studies.
Methodology:
Provides versioned, provenance-tracked template and atlas resources with unambiguous resource identifiers, programmatic retrieval via a client, data management, synchronization, and continuous integration.
Topics
Details
- Tool Type:
- web application
- Added:
- 3/19/2021
- Last Updated:
- 4/11/2021
Operations
Data Inputs & Outputs
Data retrieval
Outputs
Publications
Ciric R, Thompson WH, Lorenz R, Goncalves M, MacNicol E, Markiewicz CJ, Halchenko YO, Ghosh SS, Gorgolewski KJ, Poldrack RA, Esteban O. TemplateFlow: FAIR-sharing of multi-scale, multi-species brain models. Unknown Journal. 2021. doi:10.1101/2021.02.10.430678.
Ciric R, Lorenz R, Thompson W, Goncalves M, MacNicol E, Markiewicz C, Halchenko Y, Ghosh S, Gorgolewski K, Poldrack R, Esteban O. TemplateFlow: a community archive of imaging templates and atlases for improved consistency in neuroimaging. Unknown Journal. 2021. doi:10.21203/rs.3.rs-264855/v1.