TemplateFlow

TemplateFlow provides a centralized, versioned archive of human and nonhuman neuroimaging templates and atlases to standardize reference anatomies and support reproducible neuroimaging analyses.


Key Features:

  • Centralized Repository: A centralized archive of human and nonhuman imaging templates and atlases.
  • Programmatic Access: A client for programmatic retrieval and integration of template and atlas resources.
  • Extensibility and Contribution: A transparent pathway for researchers to contribute and vet new templates and atlases.
  • Software Engineering Best Practices: Implementation of unambiguous resource identification, data management, versioning, synchronization, programmatic extensibility, and continuous integration.
  • FAIR Principles Compliance: Adoption of findable, accessible, interoperable, and reusable standards for distributing templates and atlases.

Scientific Applications:

  • Multiverse template analyses: Enables testing whether neuroimaging results generalize across standard references, templates, atlases, and spatial scales.
  • Cross-species reference standardization: Supports analyses using both human and nonhuman templates and atlases to facilitate comparative neuroimaging studies.

Methodology:

Provides versioned, provenance-tracked template and atlas resources with unambiguous resource identifiers, programmatic retrieval via a client, data management, synchronization, and continuous integration.

Topics

Details

Tool Type:
web application
Added:
3/19/2021
Last Updated:
4/11/2021

Operations

Data Inputs & Outputs

Publications

Ciric R, Thompson WH, Lorenz R, Goncalves M, MacNicol E, Markiewicz CJ, Halchenko YO, Ghosh SS, Gorgolewski KJ, Poldrack RA, Esteban O. TemplateFlow: FAIR-sharing of multi-scale, multi-species brain models. Unknown Journal. 2021. doi:10.1101/2021.02.10.430678.

Ciric R, Lorenz R, Thompson W, Goncalves M, MacNicol E, Markiewicz C, Halchenko Y, Ghosh S, Gorgolewski K, Poldrack R, Esteban O. TemplateFlow: a community archive of imaging templates and atlases for improved consistency in neuroimaging. Unknown Journal. 2021. doi:10.21203/rs.3.rs-264855/v1.

Links