Tensorpac
Tensorpac analyzes Phase-Amplitude Coupling (PAC) in neurophysiological data to quantify cross-frequency interactions of neural oscillations relevant to multi-scale integration and cognitive processes.
Key Features:
- Computational Efficiency: Leverages tensor computations combined with parallel computing techniques to accelerate PAC analyses on large datasets.
- Comprehensive Methodological Implementation: Integrates a wide array of established PAC methods within a single package to facilitate comparative studies and method validation.
- Statistical Analysis Capabilities: Provides statistical tools for analyzing PAC measures to assess reliability and validity of results.
- Advanced Visualization: Offers extended visualization capabilities for exploration and presentation of PAC data.
- Mitigation of Spurious Results: Addresses issues related to spurious PAC arising from varying signal properties and analysis parameters.
Scientific Applications:
- Cross-frequency interaction analysis: Quantifies phase–amplitude coupling between neural oscillations to study cross-frequency interactions.
- Neural integration studies: Supports investigation of multi-scale integration mechanisms in the brain relevant to cognitive processes.
- Large-scale electrophysiology: Enables PAC analysis on large and complex electrophysiological datasets.
- Method comparison and validation: Facilitates comparative studies and validation of PAC estimation methods.
Methodology:
Implements tensor computations and parallel computing techniques to compute Phase-Amplitude Coupling using a variety of established PAC methods, accompanied by statistical analyses and visualization of PAC measures.
Topics
Details
- License:
- BSD-3-Clause
- Programming Languages:
- Python
- Added:
- 1/18/2021
- Last Updated:
- 2/26/2021
Operations
Publications
Combrisson E, Nest T, Brovelli A, Ince RA, Soto JL, Guillot A, Jerbi K. Tensorpac : an open-source Python toolbox for tensor-based Phase-Amplitude Coupling measurement in electrophysiological brain signals. Unknown Journal. 2020. doi:10.1101/2020.04.17.045997.