ThermusQ

ThermusQ consolidates genomic and pathway data for Thermus thermophilus, T. oshimai, and related Thermus phages across 22 strains to support comparative genomics and metabolic analyses.


Key Features:

  • Genomic Data Repository: Hosts genome sequences from 22 strains of Thermus thermophilus and T. oshimai and includes sequences from known Thermus phages.
  • Pathway Mapping: Provides detailed metabolic pathway maps specific to Thermus strains for analysis of biochemical capabilities and adaptations.
  • Data Retrieval Tools: Includes tools for accessing and retrieving sequence and pathway data for downstream analysis.
  • Strain-Specific Insights: Aggregates genomic data to enable identification of strain-specific genetic features and diversity within Thermus thermophilus.

Scientific Applications:

  • Comparative Genomics: Compare genomes across strains to identify evolutionary trends and functional genomic differences.
  • Metabolic Pathway Analysis: Analyze Thermus-specific metabolic processes using pathway maps to investigate biochemical capabilities relevant to biotechnology and industrial microbiology.
  • Biochemical Simulations: Provide datasets for modeling cellular processes and simulating biochemical pathways in Thermus species.

Methodology:

Integration of genomic sequences with pathway information, meticulous data curation, and development of tools for data retrieval and analysis.

Topics

Details

Cost:
Free of charge
Tool Type:
web application
Added:
1/8/2024
Last Updated:
11/24/2024

Operations

Publications

Hijikata A, Oshima T, Yura K, Bessho Y. ThermusQ: Toward the cell simulation platform for <i>Thermus thermophilus</i>. The Journal of General and Applied Microbiology. 2023;69(2):59-67. doi:10.2323/jgam.2023.07.001. PMID:37460312.