TIGA

TIGA prioritizes gene-trait associations from genome-wide association studies (GWAS) to support drug target ranking by aggregating multistudy evidence and deriving confidence scores that link protein-coding genes to phenotypes.


Key Features:

  • Rational Ranking and Filtering: Provides systematic evaluation of the strength, specificity, and relevance of genotype-phenotype associations derived from GWAS data for target prioritization.
  • Data Aggregation Across Studies: Aggregates GWAS data across multiple studies using existing curation and harmonization efforts to enable cross-study assessment of associations.
  • Confidence Scoring System: Computes confidence scores for gene-trait associations using aggregated statistics and bibliometric metrics, including iCite Relative Citation Ratio and meanRank scores, to link protein-coding genes with phenotypes.
  • Scientific Consensus Evaluation: Incorporates bibliometric assessment to quantify the level of scientific consensus around specific gene-trait associations.

Scientific Applications:

  • Drug target hypothesis generation and prioritization: Produces ranked and scored gene-trait associations to support identification and ranking of candidate therapeutic targets from GWAS evidence.
  • Cross-study interpretation of GWAS evidence: Enables assessment of association robustness and relevance by integrating evidence across multiple GWAS datasets.

Methodology:

Aggregates multivariate evidence from multiple GWAS studies, performs statistical analysis and bibliometric evaluations (including iCite Relative Citation Ratio and meanRank scores), and derives aggregated confidence scores linking protein-coding genes to phenotypes using curated and harmonized datasets.

Topics

Details

License:
BSD-2-Clause
Programming Languages:
R, Python, Shell
Added:
1/18/2021
Last Updated:
2/27/2021

Operations

Publications

Yang JJ, Grissa D, Lambert CG, Bologa CG, Mathias SL, Waller A, Wild DJ, Jensen LJ, Oprea TI. TIGA: Target illumination GWAS analytics. Unknown Journal. 2020. doi:10.1101/2020.11.11.378596.

Links