TimeTree
TimeTree aggregates divergence-time estimates from molecular evolution and phylogenetics literature to provide comparative timetrees and timelines for studying species divergence and evolutionary timescales.
Key Features:
- Data aggregation: Aggregates peer-reviewed publications in molecular evolution and phylogenetics to derive divergence-time estimates.
- Extensive database: Contains data from over 3,000 studies and more than 97,000 species spanning the tree of life.
- Timetree and timeline generation: Produces timetrees for groups of species and timelines that trace the evolutionary history of individual species over time.
- Integration with geological and environmental history: Aligns divergence-time information with Earth's geological events and environmental history.
- Statistical synthesis: Synthesizes molecular clock analyses to produce summary statistics of divergence times from hierarchical data.
Scientific Applications:
- Biodiversity studies: Provides temporal context for speciation and diversification analyses across taxa.
- Evolutionary development (evo-devo): Supplies divergence-time estimates for comparative analyses of developmental processes.
- Disease research: Offers evolutionary timescales relevant to comparative studies of disease-related lineages.
Methodology:
Aggregates divergence-time estimates from peer-reviewed molecular evolution and phylogenetics literature, interprets complex and hierarchical molecular-clock analyses, and synthesizes these data into summary statistics and visual representations.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 8/3/2017
- Last Updated:
- 6/21/2022
Operations
Publications
Kumar S, Stecher G, Suleski M, Hedges SB. TimeTree: A Resource for Timelines, Timetrees, and Divergence Times. Molecular Biology and Evolution. 2017;34(7):1812-1819. doi:10.1093/molbev/msx116. PMID:28387841.
Kumar S and Hedges SB. TimeTree2: species divergence times on the iPhone. Bioinformatics. 2011; 27:2023-4. doi: 10.1093/bioinformatics/btr315