ToxPiGIS Toolkit

ToxPiGIS Toolkit integrates the Toxicological Prioritization Index (ToxPi) framework with ArcGIS to generate geospatial ToxPi diagrams for multi-domain environmental and public-health data visualization and analysis.


Key Features:

  • Integration with ArcGIS: Integrates ToxPi diagrams into ArcGIS geospatial data layers for map-based visualization.
  • Interactive Feature Layers: Generates interactive feature layers that embed ToxPi diagrams representing multi-slice data attributes.
  • ArcGIS Toolbox (ToxPiToolbox.tbx): Provides an ArcGIS Toolbox (ToxPiToolbox.tbx) to draw geographically located ToxPi diagrams onto feature layers within ArcGIS Pro.
  • Modular Python Scripts: Includes Python scripts to create predesigned layer files containing ToxPi feature layers from the command line.
  • Data Manipulation and Preprocessing Routines: Includes Python routines for data manipulation and preprocessing to prepare datasets for ToxPi diagram generation.
  • Customization Options: Provides options to customize ToxPi diagrams and layer parameters.

Scientific Applications:

  • Environmental studies: Integrates multiple exposure and environmental indicator domains into single geospatial visualizations.
  • Epidemiology: Visualizes multi-domain drivers of disease vulnerability and spatial risk.
  • Urban planning: Supports incorporation of diverse socio-environmental metrics into spatial planning analyses.
  • Public health research: Facilitates comparative analysis of population-level health vulnerability across geographic units.
  • COVID-19 vulnerability analysis: Applied to analyze COVID-19 pandemic vulnerability across U.S. counties by comparing various drivers of risk.

Methodology:

The toolkit uses ArcGIS capabilities combined with the ToxPi framework to generate feature layers that incorporate ToxPi diagrams, which are embedded into GIS maps for interactive visualization and spatial analysis.

Topics

Details

License:
Not licensed
Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Mac, Linux, Windows
Programming Languages:
Python
Added:
3/11/2022
Last Updated:
3/11/2022

Operations

Publications

Fleming J, Marvel SW, Motsinger-Reif AA, Reif DM. ToxPi*GIS Toolkit: Creating, viewing, and sharing integrative visualizations for geospatial data using ArcGIS. Unknown Journal. 2021. doi:10.1101/2021.10.08.21264756. PMID:34671776. PMCID:PMC8528084.

Links