TreeBeST

TreeBeST, which stands for (gene) Tree Building guided by Species Tree, is a versatile program that builds, manipulates and displays phylogenetic trees. It is particularly designed for building gene trees with a known species tree and is highly efficient and accurate. TreeBeST is previously known as NJTREE. It has been largely used in the TreeFam database, Ensembl Compara and OPTIC database of Chris Ponting group.
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Topics

Phylogenetics

Details

Added:
3/7/2024
Last Updated:
11/6/2024

Operations

Data Inputs & Outputs

Phylogenetic analysis

Outputs

    Documentation

    General
    https://treesoft.sourceforge.net/treebest.shtml

    Links

    Repository
    https://github.com/lh3/treebest
    Repository
    https://github.com/Ensembl/treebest
    (This repository holds the necessary changes of Heng Li's version to run the latest Ensembl Compara pipeline. Ensembl is not the official maintainer of this software.)
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