Treenome Browser

Treenome Browser visualizes genomic variation across millions of genomes in the context of large-scale phylogenetic trees to support analysis of evolutionary relationships and genetic diversity.

Key Features:

• Interactive visualization: Displays genomic variation aligned to phylogenetic tree structure to facilitate integrated visual analysis.
• Scalability: Scales to millions of genomes and large phylogenies for large-scale genomic studies.
• Customization and Flexibility: Supports visualization of user-provided phylogenetic trees via taxonium.org.
• Data integration: Combines genomic sequences with phylogenetic information to produce integrated visual representations.

Scientific Applications:

• Viral Genomics: Applied to visualize SARS-CoV-2 genomes for tracking viral evolution and transmission patterns.
• Comparative Genomics: Enables comparison of multiple genomes within a phylogenetic context to examine genetic variation across taxa.
• Phylogenetics: Supports construction and analysis of phylogenetic trees to infer evolutionary relationships.

Methodology:

Combines genomic sequences with phylogenetic information to create integrated visual representations.