TrioVis

It is a visualisation tool developed to assist filtering on coverage and variant frequency for genomic variants from exome sequencing of parent-child trios. It organises the variant data by grouping each variant based on the laws of Mendelian inheritance. Taking three Variant Call Format files as input, the tool provides a user interface to test different coverage thresholds, to find the optimal threshold values, and to gain insights into the global effects of filtering.

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Details

Tool Type:
desktop application
Operating Systems:
Linux, Windows, Mac
Programming Languages:
Java, C
Added:
12/18/2017
Last Updated:
12/10/2018

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Documentation

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