unitas

unitas is a tool to annotate small non-coding RNA datasets generated by high-throughput sequencing. The unitas algorithm uses the latest reference sequences from public online databases for the annotation.

Topic

RNA;Sequence analysis;Nucleic acid structure analysis

Detail

  • Operation: Sequence annotation

  • Software interface: Command-line user interface

  • Language: Perl

  • License: Creative Commons Attribution Non-Commercial License V2.0

  • Cost: Free

  • Version name: 1.71

  • Credit: The Natural and Medical Sciences Research Center of the University Medicine Mainz (NMFZ), the International PhD Programme coordinated by the Institute of Molecular Biology (IMB), Mainz, the Boehringer Ingelheim Foundation.

  • Input: FASTA;FASTQ;SAM;ELAND3

  • Output: SAM;ELAND3

  • Contact: dgebert@students.uni-mainz.de

  • Collection: -

  • Maturity: -

Publications

  • unitas: the universal tool for annotation of small RNAs.
  • Gebert D, et al. unitas: the universal tool for annotation of small RNAs. unitas: the universal tool for annotation of small RNAs. 2017; 18:644. doi: 10.1186/s12864-017-4031-9
  • https://doi.org/10.1186/s12864-017-4031-9
  • PMID: 28830358
  • PMC: PMC5567656

Download and documentation

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