Universal-mer
Universal-mer is the k-mer counting tool for all possible size of k at once. More than typical k-mer counting tool, the program can summarize the exact counting result of 1-mers to l-mers at once where l = the length of longest repeated substring in the input sequence which now is set the maximum length to 100000-mers. The program can report exactly the number of all repeat (freq>1) and unique(freq = 1) mers , and the number of all possible substrings of the sequence without cutting off any low frequency mers.
Topics
Details
- License:
- Freeware
- Cost:
- Free of charge
- Tool Type:
- command-line tool
- Operating Systems:
- Mac, Windows
- Programming Languages:
- C
- Added:
- 7/28/2023
- Last Updated:
- 7/28/2023
Operations
Downloads
- BinariesVersion: 1.0.0https://sourceforge.net/projects/universal-mer/
- BinariesVersion: 1.0.0https://github.com/Ugrammer/Universal-Mer_Advance/releases/tag/v1.0.0
Links
Technical monitoring', 'Other
https://ugrammer.github.io